Mapped reads for uncultivated Peregrinibacteria bacterium UBA12473 ge... - SRA

SRX3571990: Mapped reads for uncultivated Peregrinibacteria bacterium UBA12473 genome recovered from SRX764834
1 ILLUMINA (Illumina HiSeq 2000) run: 74,255 spots, 19.9M bases, 9.2Mb downloads

Design: Reads from SRX764834 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA12473 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

show Abstracthide Abstract

Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Peregrinibacteria bacterium UBA12473 genome recovered from SRX764834

SAMN08019927 • SRS2842978 • All experiments • All runs

Organism: Candidatus Peregrinibacteria bacterium

Library:

Name: UBA12473_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 74,255 spots, 19.9M bases, 9.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR6482097	74,255	19.9M	9.2Mb	2018-01-29

ID:: 4957492

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity